A new bioinformatics analysis tools framework at EMBL-EBI
نویسندگان
چکیده
منابع مشابه
A new bioinformatics analysis tools framework at EMBL–EBI
The EMBL-EBI provides access to various mainstream sequence analysis applications. These include sequence similarity search services such as BLAST, FASTA, InterProScan and multiple sequence alignment tools such as ClustalW, T-Coffee and MUSCLE. Through the sequence similarity search services, the users can search mainstream sequence databases such as EMBL-Bank and UniProt, and more than 2000 co...
متن کاملThe EMBL-EBI bioinformatics web and programmatic tools framework
Since 2009 the EMBL-EBI Job Dispatcher framework has provided free access to a range of mainstream sequence analysis applications. These include sequence similarity search services (https://www.ebi.ac.uk/Tools/sss/) such as BLAST, FASTA and PSI-Search, multiple sequence alignment tools (https://www.ebi.ac.uk/Tools/msa/) such as Clustal Omega, MAFFT and T-Coffee, and other sequence analysis tool...
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Since 2009 the EMBL-EBI provides free and unrestricted access to several bioinformatics tools via the user's browser as well as programmatically via Web Services APIs. Programmatic access to these tools, which is fundamental to bioinformatics, is increasingly important as more high-throughput data is generated, e.g. from proteomics and metagenomic experiments. Access is available using both the...
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The use of bio-‐medical ontologies for the annotation, integration and analysis of biological data is now well established in bioinformatics. The range and diversity of ontologies has increased dramatically over the last ten years and community efforts such as the OBO foundry have been instrumental in coordinating this activity. The demand for unified mechanisms for accessing large collections...
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Understanding what the IntAct database is, what type of data it stores and how the data are organised Knowing the different ways you can access and query the data that are stored in IntAct Understanding the information given in an IntAct entry and the results table pages Performing complex queries that can help to refine your search results Representing simple networks with the networkView func...
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ژورنال
عنوان ژورنال: Nucleic Acids Research
سال: 2010
ISSN: 0305-1048,1362-4962
DOI: 10.1093/nar/gkq313